Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015788661.1_cds_XP_016474603.1_626
CDS Infomation

[gene=LOC107796335] [db_xref=GeneID:107796335] [protein=indole-3-acetic acid-amido synthetase GH3.6-like] [protein_id=XP_016474603.1] [location=complement(join(32159..32745,32854..33758,34079..34410))] [gbkey=CDS]
Sequence

ATGGAGAAAAACATACCTGGTAGAGAGGAGAACAAGAAGTCCACTGATTGTAGTATCGCA
GAGGACAACAAGTCGGCTCTTCAGTTCATTGAAGAGGTGACTACCAACGTTGACGAGGTC
CAAAAGAGAGTTGTTGCTGAAATCCTATCGAGGAATGCCAATGTTGAGTACTTACAGCGT
CATAATCTCAACGGTCACACTGATAGAGAGACGTTCAAGAAAGTCATACCTGTCATCACG
TATGAAGATATTCAGCCTGATATCAACCGTATAGCGGATGGTGATAAATCTCCAATCCTC
TGCTCCCAACCCATCTCTGAATTCTTGACAAGTTCTGGGACGTCCGGAGGGGAGAGAAAG
TTGATGCCAATAATAGAGGAAGATTTTGGGAGGAGATCACAGCTTTACAGCCTTATGATA
TCTGTGGTAAGCCAATCTGTTGGAGATTTGGAAAAGGGCAAAGGAATGTATTTCATGTTC
GTAAAGTCTGAAACCAAGACCCCAGGAGGATTACTAGCTCGCCCTGTTTTAACTAGTATT
TTCAAGAGGCCTCATTTCCACAACTCAAACTACACCAGTCCAATTGAGACTATTCTCTGC
CTAGACTCTTATCAGAGCATGTACTCCCAAATGCTTTGTGGCCTCTGCCAAAACAAACAA
GTCCTACGTGTAGGCGCCGTGTTTGCATCCGCTTTCATCCGTGCTATGCGATTCTTGGAG
AAGCACTGGTCTCTACTTTGTAACGATATCCGAACTGGAACCATTAACGCACAAATTACT
CATCTTTCAGTGAGAGAATCAGTGATGAAAATCCTAAAACCTAACCCAGAGTTAGCTGAT
TTTATTGATGCTGAATGCAGAAAAAGTTCATGGCAAGGGATTGTCACTAGGCTGTGGCCT
AATACCAAGTATGTGGATGTTGTCGTGACTGGTACCATGTCACAATATATACCAACCCTT
GAGTATTACAGCAGTAACCTCCCTCTTGTTAGTACCACGTATGCTTCCTCGGAATGTTCC
TTTGGAATCAACTTGAACCCCCTTTGTAAACCCAGCGAAGTCTCTTACACGCTCATTCCC
ACCATGGGCTATTTTGAGTTCTTACCAATTCACAGAATCAATAATGAAGTCAAAAATTCT
ATCTCCATGTCCGAGTTGCAAGAACAACAACAATTGGTCGATTTGGTTGATGTCAAGATT
GGGCAGGAGTACGAGCTTGTTGTTACCACATATTCTGGACTCTATAGATACAGGGTGGGT
GACGTGCTTCGGGTTGCTGGATACAAGAATAACGCACCTCAGTTCACCTTCGTTTGTCGG
GAAAATGTAATCTTGAGCATTGATTCCGACAAGACTGATGAAGCTGAGCTACAAAATGCA
GTGAAAAATGCAGTGAGCGATCTGATGCCATTCGATGCACATGTAACCGAGTACACAAGC
TATGCTGATATTACCACCATTCCCGGCCACTATGTCCTATTCTTGGAGCTGAGAGTGAAT
AGCTCTACCCCAATCCCCCCTTCAGTGTTCGAAAATTGTTGCCTCAACATTGAAGAATCT
CTAAACAGCGTCTACCGCCAGGGGCGTGCATCTGACAAATCTATCGGGCCTCTGGAAATC
AGGATAGTGGAAACAGGAACTTTCGACAAACTCATGGACTATTGCATTAGTTTAGGTGCT
TCCATAAACCAATACAAGACACCGCGGTGTGTGAAATTAACACCCCTTGTTGAGCTGTTG
AATTCTAGGGTCGTGTCCAGTCATTTCAGTCAAACATGTCCAAATTGGATCCCTGGCGAC
AAGCAATGGAACAACATGAATTGA

Peptide Sequence

PEP ID

XP_016474603.1
PEP Infomation

PREDICTED: indole-3-acetic acid-amido synthetase GH3.6-like [Nicotiana tabacum]
Sequence

MEKNIPGREENKKSTDCSIAEDNKSALQFIEEVTTNVDEVQKRVVAEILSRNANVEYLQR
HNLNGHTDRETFKKVIPVITYEDIQPDINRIADGDKSPILCSQPISEFLTSSGTSGGERK
LMPIIEEDFGRRSQLYSLMISVVSQSVGDLEKGKGMYFMFVKSETKTPGGLLARPVLTSI
FKRPHFHNSNYTSPIETILCLDSYQSMYSQMLCGLCQNKQVLRVGAVFASAFIRAMRFLE
KHWSLLCNDIRTGTINAQITHLSVRESVMKILKPNPELADFIDAECRKSSWQGIVTRLWP
NTKYVDVVVTGTMSQYIPTLEYYSSNLPLVSTTYASSECSFGINLNPLCKPSEVSYTLIP
TMGYFEFLPIHRINNEVKNSISMSELQEQQQLVDLVDVKIGQEYELVVTTYSGLYRYRVG
DVLRVAGYKNNAPQFTFVCRENVILSIDSDKTDEAELQNAVKNAVSDLMPFDAHVTEYTS
YADITTIPGHYVLFLELRVNSSTPIPPSVFENCCLNIEESLNSVYRQGRASDKSIGPLEI
RIVETGTFDKLMDYCISLGASINQYKTPRCVKLTPLVELLNSRVVSSHFSQTCPNWIPGD
KQWNNMN

Transcript Sequence

Gene sequence data has not been registered.